参考文献/References:
Argentina J. E., Angermeier P. L., Hallerman E. M., Welsh S. A. 2018. Spatial extent of analysis influences observed patterns of population genetic structure in a widespread darter species (Percidae). Freshwater Biol, 63: 1185–1198
Austin J. D., Davila J. A., Lougheed S. C., Boag P. T. 2003. Genetic evidence for female-biased dispersal in the bullfrog, Rana catesbeianan (Ranidae). Mol Ecol, 12: 3165–3172
Avise J. C., Hamrick J. L. 1996. Conservation genetics: case histories from nature. New York, NY: Chapman & Hall
Balkenhol N., Cushman S., Storfer A., Waits L. 2015. Landscape genetics: concepts, methods, applications. Worldwide: John Wiley & Sons
Banks S. C., Peakall R. 2012. Genetic spatial autocorrelation can readily detect sex–biased dispersal. Mol Ecol, 21(9): 2092–2105
Bekkevold D., Hansen M., Mensberg K. 2004. Genetic detection of sex-specific dispersal in historical and contemporary populations of anadromous brown trout Salmo trutta. Mol Ecol, 13: 1707–1712
Belkhir K., Borsa P., Chikhi L., Raufaste N., Bonhomme F. 1996–2004. GENETIX 4.05, logiciel sous Windows TM pour la génétique des populations. Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II, Montpellier (France).
Bonte D., Dyck H. V., Bullock J. M., Coulon A., Delgado M., Gibbs M., Lehouck V., Matthysen E., Mustin K., Saastamoinen M. 2011. Costs of dispersal. Biol Rev, 87: 290–312
Bowler D. E., Benton T. G. 2005. Causes and consequences of animal dispersal strategies: relating individual behaviour to spatial dynamics. Biol Rev, 80(2): 205–225
Bulakhova N. A., Berman D. I. 2013. Reproductive system of the Schrenckii salamander (Salamandrella schrenckii, Amphibia, Caudata, Hynobiidae) in spring and fall. Biology Bulletin, 40(8): 664–677
Burns E. L., Eldridge M. D. B., Houlden B. A. 2004. Microsatellite variation and population structure in a declining Australian Hylid Litoria aurea. Mol Ecol, 13: 1745–1757
Campbell Grant E. H., Lowe W. H., Fagan W. F. 2007. Living in the branches: population dynamics and ecological processes in dendritic networks. Ecol Lett, 10(2): 165–175
Campbell Grant E. H., Nichols J. D., Lowe W. H., Fagan W. F. 2010. Use of multiple dispersal pathways facilitates amphibian persistence in stream networks. P Natl Acad Sci USA, 107(15): 6936–6940
Chapple D. G., Keogh J. S. 2005. Complex mating system and dispersal patterns in a social lizard, Egernia whitii. Mol Ecol, 14(4): 1215–1227
Clemen G., Greven H. 2009. Sex dimorphic dentition and notes on the skull and hyobranchiumin of the hynobiid salamander Pachyhynobius shangchengensis FEI, QU & WU, 1983 (Urodela: Amphibia). Vertebr Zool, 59(1): 61–69
Clobert J., Danchin E., Dhondt A. A., Nichols J. D. 2001. Dispersal. New York: Oxford University Press
Collier N., Gardner M., Adams M., Mcmahon C. R., Benkendorff K., Mackay D. A. 2010. Contemporary habitat loss reduces genetic diversity in an ecologically specialized butterfly. J Biogeogr, 37(7): 1277–1287
Curtis H. F., Bevers M. 2002. Patchy reaction–diffusion and population abundance: the relative importance of habitat amount and arrangement. Am Nat, 159(1): 40–56
Dobson F. S. 1982. Competition for mates and predominant juvenile male dispersal in mammals. Anim Behav, 30(4): 1183–1192
Dubey S., Brown G., Madsen T., Shine R. 2008. Male-biased dispersal in a tropical Australian snake (Stegonotus cucullatus, Colubridae). Mol Ecol, 17: 3506–3514
Duellman W. E., Trueb L. 1994. The biology of amphibians. Baltimore, Maryland: Johns Hopkins University Press
Ellstrand N. C., Elam D. R. 1993. Population genetic consequences of small population size: implications for plant conservation. Annu Rev Ecol Syst, 24(24): 217–242
Excoffier L., Smouse P. E., Quattro J. M. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131(2): 479–491
Fahrig L. 2003. Effects of habitat fragmentation on biodiversity. Ann Rev Ecol Evol S, 34(2): 487–515
Fang S. G., Wan Q. H., Fujihara N. 2002. Genetic diversity of the Giant Panda (Ailuropoda melanoleuca) between big and small populations. J Appl Anim Res, 21(1): 65–74
Favre L., Balloux F., Goudet J., Perrin N. 1997. Female-biased dispersal in the monogamous mammal Crocidura russula: evidence from field data and microsatellite patterns. P Biol Sci, 264(1378): 127–132
Fei L., Ye C. Y., Jiang J. P. 2010. Colored atlas of Chinese amphibians. Chengdu: Sichuan Publishing House of Science and Technology
Finn D. S., Theobald D. M., Iv W. C. B., Poff N. L. 2006. Spatial population genetic structure and limited dispersal in a Rocky Mountain alpine stream insect. Mol Ecol, 15(12): 3553–3566
Funk W. C., Blouin M. S., Corn P. S., Maxell B. A., Pilliod D. S., Amish S., Allendorf F. W. 2005. Population structure of Columbia spotted frogs (Rana luteiventris) is strongly affected by the landscape. Mol Ecol, 14(2): 483–496
Gardner M. G., Bull C. M., Cooper S. J. B., Duffield G. A. 2001. Genetic evidence for a family structure in stable social aggregations of the Australian lizard Egernia stokesii. Mol Ecol, 10(1): 175–183
Grant E. H. C., Green L. E., Lowe W. H. 2009. Salamander occupancy in headwater stream networks. Freshwater Biol, 54: 1370–1378
Greenwood P. 1980. Mating systems, philopatry and dispersal in birds and mammals. Anim Behav: 1140–1162
H?ner O. P., Wachter B., East M. L., Streich W. J., Wilhelm K., Burke T., Hofer H. 2008. Female mate-choice drives the evolution of male-biased dispersal in a social mammal. Nature, 448(7155): 798–801
Hammond R. L., Handley L. J. L., Winney B. J., Bruford M. W., Perrin N. 2006. Genetic evidence for female-biased dispersal and gene flow in a polygynous primat. P Roy Soc B-Biol Sci, 273(1585): 479–484
Handley L., Perrin N. 2007. Advances in our understanding of mammalian sex-biased dispersal. Mol Ecol, 16: 1559–1578
Hansson B., Jack L., Christians J. K., Pemberton J. M., Akesson M., Westerdahl H., Hasselquist D. 2007. No evidence for inbreeding avoidance in a great reed warbler population. Behav Ecol, 18: 157-164
Hayden J. 2006. Gene flow in complex landscapes: testing multiple hypotheses with causal modeling. Am Nat, 168(4): 486–499
Helfer V., Broquet T., Fumagalli L. 2012. Sex-specific estimates of dispersal show female philopatry and male dispersal in a promiscuous amphibian, the alpine salamander (Salamandra atra). Mol Ecol, 21(19): 4706–4720
Holland M. M., Parson W. 2011. GeneMarker(R) HID: A reliable software tool for the analysis of forensic STR data. J Forensic Sci, 56(1): 29-35
Horton R. E. 1945. Erosional of streams and their drainage basin: hydrophysical approach to quantitative morphology. Geol Soc Am Bull, 56: 255–370
Hu Y. B., Zhan X. J., Qi D. W., Wei F. W. 2010. Spatial genetic structure and dispersal of giant pandas on a mountain-range scale. Conserv Genet, 11(6): 2145–2155
Jaisuk C., Senanan W. 2018. Effects of landscape features on population genetic variation of a tropical stream fish, Stone lapping minnow, Garra cambodgiensis, in the upper Nan River drainage basin, northern Thailand. Peerj, 6(22): e4487
Kalinowski S. T., Taper M. L., Marshall T. C. 2007. Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment. Mol Ecol Res, 8: 103–106
Kalinowski S. T., Wagner A. P., Taper M. L. 2006. ML‐relate: a computer program for maximum likelihood estimation of relatedness and relationship. Mol Ecol Notes, 6(2): 576–579
Keller L. F., Waller D. M. 2002. Inbreeding effects in wild populations. Trends Ecol Evol, 17(5): 230–241
Koenig W. D., Pitelka F. A., Carmen W. J., Mumme R. L., Stanback M. T. 1992. The evolution of delayed dispersal in cooperative breeders. Q Rev Biol, 67(2): 111–150
Konovalov D. A., Manning C., Henshaw M. T. 2004. KINGROUP: A program for pedigree relationship reconstruction and kin group assignments using genetic markers. Mol Ecol Resour, 4(4): 779–782
Lampert K. P., Rand A. S., Mueller U. G., Ryan M. J. 2003. Fine-scale genetic pattern and evidence for sex-biased dispersal in the tungara frog, Physalaemus pustulosus. Mol Ecol, 12: 3325–3334
Lebigre C., Alatalo R., Siitari H. 2010. Female-biased dispersal alone can reduce the occurrence of inbreeding in black grouse (Tetrao tetrix). Mol Ecol, 19: 1929–1939
Liebgold E. B., Brodie E. D., Cabe P. R. 2011. Female philopatry and male–biased dispersal in a direct–developing salamander, Plethodon cinereus. Mol Ecol, 20(2): 249–257
Lowe W. H., Likens G. E., Power M. E. 2006. Linking scales in stream ecology. BioScience, 56: 591–597
Lowe W. H., Nislow K. H., Bolger D. T. 2004. Stage-specific and interactive effects of sedimentation and trout on a headwater stream salamander. Ecol Appl, 14(1): 164–172
Meirmans P. G. 2006. Using the AMOVA framework to estimate a standardized genetic differentiation measure. Evolution, 60: 2399–2402
Meirmans P. G., Hedrick P. W. 2011. Assessing population structure: FST and related measures. Mol Ecol Res, 11: 5–18
Morin P. A., Moore J. J., Chakraborty R., Jin L., Goodall J., Woodruff D. S. 1994. Kin selection, social structure, gene flow, and the evolution of chimpanzees. Science, 265: 1193–1201
Mossman C. A., Waser P. M. 1999. Genetic detection of sex–biased dispersal. Mol Ecol, 8(6): 1063–1067
Moyle P. B., Cech J. J. 1988. Fishes: an introduction to ichthyology. New Jersey, USA.: Prentice Hall, Englewood Cliffs
Mullen L. B., Woods H. A., Schwartz M. K., Sepulveda A. J., Lowe W. H. 2010. Scale-dependent genetic structure of the Idaho giant salamander (Dicamptodon aterrimus) in stream networks. Mol Ecol, 19(5): 898–909
Muneepeerakul R., Bertuzzo E., Lynch H. J., Fagan W. F., Rinaldo A., Rodrigueziturbe I. 2008. Neutral metacommunity models predict fish diversity patterns in Mississippi-Missouri basin. Nature, 453(7192): U220–U229
Nagy M., Günther L., Kn?rnschild M., Mayer F. 2013. Female-biased dispersal in a bat with a female-defence mating strategy. Mol Ecol, 22(6): 1733–1745
Olah G., Smith A. L., Asner G. P., Brightsmith D. J., Heinsohn R. G., Peakall R. 2017. Exploring dispersal barriers using landscape genetic resistance modelling in scarlet macaws of the Peruvian Amazon. Landscape Ecol, 32(2): 445–456
Orsini L., Vanoverbeke J., Swillen I., Mergeay J., De M. L. 2013. Drivers of population genetic differentiation in the wild: isolation by dispersal limitation, isolation by adaptation and isolation by colonization. Mol Ecol, 22(24): 5983–5999
Palo J. U., Lesbarreres D., Schmeller D. S., Primmer C. R., Merila J. 2004. Microsatellite marker data suggest sex-biased dispersal in the common frog Rana temporaria. Mol Ecol, 13: 2865–2869
Pan T., Wang H., Hu C. C., Shi W. B., Zhao K., Huang X., Zhang B. W. 2014. Range-wide phylogeography and conservation genetics of a narrowly endemic stream salamander, Pachyhynobius shangchengensis (Caudata, Hynobiidae): implications for conservation. Genet Mol Res, 13(2): 2873–2885
Pan T., Wang H., Pablo O., Hu C. C., Wu G. Y., Qian L. F., Sun Z. L., Shi W. B., Yan P., Wu X. B., Zhang B. W. 2019. Long-term sky islands generate highly divergent lineages of a narrowly distributed stream salamander (Pachyhynobius shangchengensis) in mid-latitude mountains of East Asia. BMC Evol Biol, 1: 19
Paris D., Nicholls A. O., Hall A., Harvey A., Massaro M. 2016. Female-biased dispersal in a spatially restricted endemic island bird. Behav Ecol Sociobiol, 70(12): 2061–2069
Peakall R., Beattie A. J. 1995. Does ant dispersal of seeds in Sclerolaena diacantha (Chenopodiaceae) generate local spatial genetic structure? Heredity, 75(4): 351–361
Peakall R., Smouse P. E. 2006. GenAlEx 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes, 6: 288–295
Pilliod D. S., Peterson C. R., Ritson P. I. 2002. Seasonal migration of Columbia spotted frogs (Rana luteiventris) among complementary resources in a high mountain basin. Can J Zool, 80(11): 1849–1862
Pritchard J. K., Stephens M., Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics, 155: 945–959
Pusey A. E. 1987. Sex-biased dispersal and inbreeding avoidance in birds and mammals. Trends Ecol Evol, 2: 295–299
Queller D. C., Goodnight K. F. 1989. Estimating relatedness using genetic markers. Evolution, 43: 258–275
Reed D. H. 2005. Relationship between population size and fitness. Conserv Biol, 19(2): 563–568
Ritland K. 1996. Estimators for pairwise relatedness and individual inbreeding coefficients. Genet Res, 67: 175–185
Saastamoinen M., Bocedi G., Cote J., Legrand D., Guillaume F., Wheat C. W., Fronhofer E. A., Garcia C., Henry R., Husby A. 2018. Genetics of dispersal. Biol Rev, 93(1): 574–599
Sambrook J., Fritsch E. F., Maniatis T. 1989. Molecular cloning. New York: Cold Spring Harbor Laboratory Press
Smith A. L., Landguth E. L., Bull C. M., Banks S. C., Gardner M. G., Driscoll D. A. 2016. Dispersal responses override density effects on genetic diversity during post-disturbance succession. Proc Biol Sci, 283(1827): 20152934
Smouse P. E., Peakall R. 1999. Spatial autocorrelation analysis of multi-allele and multi-locus genetic microstructure. Heredity, 82(5): 561–573
Spear S. F., Peterson C. R., Matocq M. D., Storfer A. 2005. Landscape genetics of the blotched tiger salamander (Ambystoma tigrinum melanostictum). Mol Ecol, 14(8): 2553–2564
Stiver K. A., Desjardins J. K., Fitzpatrick J. L., Neff B., Quinn J. S., Balshine S. 2007. Evidence for size and sex–specific dispersal in a cooperatively breeding cichlid fish. Mol Ecol, 16(14): 2974–2984
Storfer A., Murphy M. A., Evans J. S., Goldberg C. S., Robinson S., Spear S. F., Dezzani R., Delmelle E., Vierling L., Waits L. P. 2007. Putting the "landscape" in landscape genetics. Heredity, 98(3): 128–142
Stow A. J., Sunnucks P., Briscoe D. A., Gardner M. G. 2001. The impact of habitat fragmentation on dispersal of Cunningham’s skink (Egernia cunninghami): evidence from allelic and genotypic analyses of microsatellites. Mol Ecol, 10(4): 867–878
Talbot B., Vonhof M. J., Broders H. G., Fenton B., Keyghobadi N. 2017. Comparative analysis of landscape effects on spatial genetic structure of the big brown bat and one of its cimicid ectoparasites. Ecol Evol, 7(20): 8210–8219
Taylor A. C., Horsup A., Johnson C. N., Sunnucks P., Sherwin B. 1997. Relatedness structure detected by microsatellite analysis and attempted pedigree reconstruction in an endangered marsupial, the northern hairy-nosed wombat Lasiorhinus krefftii. Mol Ecol, 6(1): 9–19
Taylor M. I., Morley J. I., Rico C., Balshine S. 2003. Evidence for genetic monogamy and female-biased dispersal in the biparental mouthbrooding cichlid Eretmodus cyanostictus from Lake Tanganyika. Mol Ecol, 12(11): 3173–3177
Tucker J. M., Allendorf F. W., Truex R. L., Schwartz M. K. 2017. Sex–biased dispersal and spatial heterogeneity affect landscape resistance to gene flow in fisher. Ecosphere, 8(6): e01839
Vadim Y. V., Valentina K. N. 2015. Seasonal dynamics of male and female reproductive systems in the Siberian Salamander, Salamandrella keyserlingii (Caudata, Hynobiidae). Asian Herpetol Res, 6(3): 169–183
Wang H., Shi W. B., Zhu L. F., Luo X., Chen Z., Xie W. L., Han D. M., Chang Q., Zhang B. W. 2010. Isolation and characterization of fourteen polymorphic tetranucleotide microsatellites for Shangcheng Stout Salamander (Pachyhynobius shangchengensis). Conservat Genet Resour, 2: 121–123
Wang J. 2002. An estimator for pairwise relatedness using molecular markers. Genetics, 160: 1203–1215
Wang J. 2011. COANCESTRY: a program for simulating, estimating and analysing relatedness and inbreeding coefficients. Mol Ecol Resour, 11: 141–145
Wang Y., Lane A., Ding P. 2012. Sex-biased dispersal of a frog (Odorrana schmackeri) is affected by patch isolation and resource limitation in a fragmented landscape. PLoS One, 7(10): e47683
Wilbur H. M. 1980. Complex life-cycles. Annu Rev Ecol Syst, 11: 67–93
Wright S. 1965. The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution, 19(3): 395–420
Zhao Y. Y., Zhang Y. H., Li X. C. 2013. Molecular phylogeography and population genetic structure of an endangered species Pachyhynobius shangchengensis (hynobiid Salamander) in a fragmented habitat of Southeastern China. PLoS One, 8(10): e78064
Zheng Y. H., Zhang Y., Shao X. M., Yin Z. Y., Zhang J. 2012. Temperature variability inferred from tree-ring widths in the Dabie Mountains of subtropical central China. Trees, 26(6): 1887–1894