[1].Isolation and Characterization of 15 Microsatellite DNA Loci for the Alpine Stream Frog Scutiger boulengeri (Anura: Megophryidae)[J].Asian Herpetological Research,2016,7(4):298-300.[doi:10.16373/j.cnki.ahr.150073]
 Zhiheng DU,Chunzhu XU and Fangyong NING*.Isolation and Characterization of 15 Microsatellite DNA Loci for the Alpine Stream Frog Scutiger boulengeri (Anura: Megophryidae)[J].Asian Herpetological Reserch(AHR),2016,7(4):298-300.[doi:10.16373/j.cnki.ahr.150073]
点击复制

Isolation and Characterization of 15 Microsatellite DNA Loci for the Alpine Stream Frog Scutiger boulengeri (Anura: Megophryidae)()
分享到:

Asian Herpetological Research[ISSN:2095-0357/CN:51-1735/Q]

卷:
7
期数:
2016年4期
页码:
298-300
栏目:
出版日期:
2016-12-25

文章信息/Info

Title:
Isolation and Characterization of 15 Microsatellite DNA Loci for the Alpine Stream Frog Scutiger boulengeri (Anura: Megophryidae)
文章编号:
AHR-2015-0073
Author(s):
Zhiheng DU Chunzhu XU and Fangyong NING*
Northeast Agricultural University, Harbin 150030, Heilongjiang, China
Keywords:
Alpine stream frogs Microsatellite DNA Tibetan Plateau Scutiger boulengeri
DOI:
10.16373/j.cnki.ahr.150073
Abstract:
Fifteen microsatellite DNA markers were developed from a transcriptome assembly of the alpine stream frog (Scutiger boulengeri).To characterize these loci, we genotyped 23 individuals collected from two sites. Eleven loci were variable, with the number of alleles ranging from one to six within each population. The expected and observed heterozygosities ranged from 0 to 0.78 and from 0 to 0.64, respectively. None of the loci was in linkage disequilibrium and one locus for one population was deviated from the Hardy-Weinberg equilibrium. We hope that these markers will offer useful tools in detecting population structure of S. boulengeri and in monitoring the fragile ecosystem of the Tibetan Plateau, where the species resides.

参考文献/References:

Fei L., Hu S., Ye C., Huang Y. 2009. Fauna Sinica. Amphibia Volume 2. Anura. Beijing: Science Press
Frost D. R. 2015. Amphibian Species of the World: An Online Reference. Version 6.0 (accessed on June 8, 2015). Electronic Database accessible at http://research.amnh.org/herpetology/amphibia/index.html. American Museum of Natural History, New York, USA
Lesica P., Allendorf F. W. 1995. When are peripheral populations valuable for conservation? Conserv Biol, 9: 753–760
Li R., Chen W., Tu L., Fu J. 2009. Rivers as barriers for high elevation amphibians: A phylogeographic analysis of the alpine stream frog of the Hengduan Mountains. J Zool, 277: 309–316
Meglecz E., Costedoat C., Dubut V., Gilles A., Malausa T., Pech N., Martin J. F. 2010. QDD: A user-friendly program to select microsatellite markers and design primers from large sequencing projects. Bioinformatics, 26: 403–404
Rangwala I., Sinsky E., Miller J. R. 2013. Amplified warming projections for high altitude regions of the northern hemisphere mid-latitudes from CMIP5 models. Environ Res Lett, 8: 024040
Raymond M., Rousset F. 1995. GENEPOP (version 1.2): Population genetics software for exact tests and ecumenicism. J Hered, 86: 248–249
Ryan M. E., Palen W. J., Adams M. J., Rochefort R. M. 2014. Amphibians in the climate vise: Loss and restoration of resilience of montane wetland ecosystems in the western US. Front Ecol Environ, 12: 232–240
Schuelke M. 2000. An economic method for the fluorescent labeling of PCR fragments. Nat Biotechnol, 18: 233–234
Selkoe K. A., Toonen R. J. 2006. Microsatellite for ecologists: A practical guide to using and evaluating microsatellite markers. Ecol Lett, 9: 615–629
The National Academies. 2009. Ecological Impacts of Climate Change. The National Academy of Sciences

更新日期/Last Update: 2016-12-25