Vida HOJATI,Eskandar Rastegar POUYANI and Kazem PARIVAR.Genetic Structure and Relationships among Populations of the Caspian Bent-toed Gecko, Tenuidactylus caspius (Eichwald, 1831) (Sauria: Gekkonidae) in Northern Iran[J].Asian Herpetological Research(AHR),2015,6(4):331-338.[doi:10.16373/j.cnki.ahr.140015]
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Genetic Structure and Relationships among Populations of the Caspian Bent-toed Gecko, Tenuidactylus caspius (Eichwald, 1831) (Sauria: Gekkonidae) in Northern Iran
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Asian Herpetological Research[ISSN:2095-0357/CN:51-1735/Q]

Issue:
2015 VoI.6 No.4
Page:
331-338
Research Field:
Original Article
Publishing date:
2015-12-25

Info

Title:
Genetic Structure and Relationships among Populations of the Caspian Bent-toed Gecko, Tenuidactylus caspius (Eichwald, 1831) (Sauria: Gekkonidae) in Northern Iran
Author(s):
Vida HOJATI1* Eskandar Rastegar POUYANI2 and Kazem PARIVAR3
1 Department of Biology, Damghan Branch, Islamic Azad University, Damghan, Iran
2 Department of Biology, Faculty of Science, Hakim Sabzevari University, Sabzevar, Iran
3 Department of Biology, Tehran Science and Research Branch, Islamic Azad University, Tehran, Iran
Keywords:
mtDNA Tenuidactylus caspius Gekkonidae phylogeny homogeneity Iranian Plateau.
PACS:
-
DOI:
10.16373/j.cnki.ahr.140015
Abstract:
The Caspian bent-toed gecko, Tenuidactylus caspius, belonging to the family Gekkonidae, is widely distributed across the northern half of Iran, especially along the southern coastal region of the Caspian Sea. It is regarded as a commensal species throughout its entire distribution. We investigated genetic variation and relationships among different populations of this species in Iran. Fragments of the mitochondrial cyt b (547 bp) and ND4 (831 bp) genes were sequenced and analyzed in 64 and 28 specimens, respectively, from 21 geographically distant localities. Cyrtopodion scabrum was used as the outgroup taxon. The data showed no significant genetic variation within the populations of T. caspius in Iran. Nevertheless, populations of Khorasan and Semnan (especially Shahrood) in northeastern Iran showed greater divergence (p-distance = 2.1%) from other Iranian populations. The low genetic variation and homogeneous structure among populations of T. caspius on either side of the Elburz Mountains suggests that this species most likely has achieved its current distribution recently and as a result of anthropogenic activities.

References:

Ahmadzadeh F., Hojati V., Faghiri A. 2010. Morphological variation between three populations of the Caspian Bent-toed gecko, Cyrtopodion caspium (Eichwald, 1831) in northern Iran: evidence for incipient speciation? Zool Middle East, 51: 31–38
Akhmedov M. I., Szczerbak N. N. 1978. Gymnodactylus caspius insularis ssp. n. (Reptilia, Sauria), a new subspecies of Gymnodactylus caspius EICHW. from Vulf Island in the Caspian Sea. Vestnik Zoologii (Kiev), 2: 80–82 (in Russian)
Alaeei M. 2009. Geomorphology of Iran. Ghoomes Publication Company, Tehran, Iran. 360 Pp.
Anderson S. C. 1999. The Lizards of Iran. Society for the Study of Amphibians and Reptiles, Ithaca, NY, pp 442
Arévalo E., Davis S. K., Sites J. W. 1994. Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in central Mexico. Syst Biol, 43: 387–418
Bandelt H. J., Forster P., R?hl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol, 16: 37–48
Bauer A. M., Masroor R., Titus-Mcquillan J., Heinicke M. P., Daza J. D., Todd R. 2013. A preliminary phylogeny of the Palearctic naked-toed geckos (Reptilia: Squamata: Gekkonidae) with taxonomic implications. Zootaxa, 3599 (4): 301–324
Carranza S., Arnold E. N., Amat F. 2004. DNA phylogeny of Lacerta (Iberolacerta) and other lacertinae lizards (Reptilia: Lacertidae): did competition cause long-term mountain restriction? Syst Biodivers, 2: 57–77
Carranza S., Arnold E. N. 2006. Systematics, biogeography and evolution of Hemidactylus geckos (Reptilia: Gekkonidae) elucidated using mitochondrial DNA sequences. Mol Phylogenet Evol, 38: 531–545
Carranza S., Arnold E. N. 2012. A review of the geckos of the genus Hemidactylus (Squamata: Gekkonidae) from Oman based on morphology, mitochondrial and nuclear data, with descriptions of eight new species. Zootaxa, 3378: 1–95
Cruzan M. B., Templeton A. R. 2000. Paleoecology and coalescence: phylogeographic analysis of hypotheses from the fossil record. Trends Ecol Evol, 15: 491–496
Davis W. K. 1974. The Mediterranean Gecko, Hemidactylus turcicus in Texas. J Herpetol, 8: 77–80
Fili N. 2012. The study of interspecies variations in different populations of Cyrtopodion scabrum in Iran. MSc. Thesis in Animal Biosystematics, Lorestan University, Iran
Gamble T., Greenbaum E., Jackman T. R., Russell A. P., Bauer A. M. 2012. Repeated Origin and Loss of Adhesive Toe pads in Geckos. PLoS ONE, 7(6): e39429. doi:10.1371/journal.pone. 0039429
Guicking D., Fritz U., Wink M., Lehr E. 2002a. New data on the diversity of the Southeast Asian leaf turtle genus Cyclemys Bell, 1834. Molecular results (Reptilia: Testudines: Geoemydinae). Faunistische Abhandlungen Staatliches Museum fur Tierkunde Dresden, 23: 75–86
Guicking D., Joger U., Wink M. 2002b. Molecular phylogeography of the viperine snake (Natrix maura) and the Dice snake (Natrix tessellata): first results. Biota, 3: 49–5
Hall T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95 ? 98 ? NT. Nucleic Acids Symp Ser, 41: 95–98.
Heidari N., Rastegar-Pouyani E., Rastegar-Pouyani N., Faizi H. 2014. Molecular phylogeny and biogeography of the genus Acanthodactylus Fitzinger, 1834 (Reptilia: Lacertidae) in Iran, inferred from mtDNA Sequences. Zootaxa, 3860(4): 379–395
Hojati V. 2012. Molecular phylogeny and gametogenesis study on the Caspian bent-toed gecko, Cyrtopodion caspium (Sauria: Gekkonidae) in northern Iran. Ph.D Thesis in Developmental Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran, pp 217
Huelsenbeck J. P., Ronquist F. 2001. Mr. Bayes: Bayesian inference of phylogeny. Bioinformatics, 17: 754–755
Kabir S., Shahriar M., Hamidul Kabir A. N. M., Uddin M. G. 2006. High salt SDS-based method for the direct extraction of genomic DNA from three different gram-negative organisms. The CDR Journal, 1: 57–64
Kami H. G. 2005. Cyrtopodion caspium caspium (Caspian bent-toed gecko, or Caspian thin-toed gecko. Herpetol Rev, 36: 79
Kindler C., B?hme W., Corti C., Gvod?k V., Jablonski D., Jandzik D., Metallinou M., ?irok P., Fritz U. 2013. Mitochondrial phylogeography, contact zones and taxonomy of grass snakes (Natrix natrix, N. megalocephala). Zool Scr, 42: 458–472
Kraus F. 2009. Alien Reptiles and Amphibians: a Scientific Compendium and Analysis. Springer Verlag, Dordrecht, The Netherlands, pp xii + 564 pp
Leviton A. E., Anderson S. C. 1984. Description of a new species of Cyrtodactylus from Afghanistan with remarks on the status of Gymnodactylus longipes and Cyrtodactylus fedtschenkoi. J Herpetol, 18: 270–276
Leviton A. E., Anderson S. C., Adler K. K., Minton S. A. 1992. Handbook to Middle East Amphibian and Reptiles. Contribution to Herpetology No: 8. Society for the Study of Amphibians and Reptiles. Oxford, OH. pp vii + 252 pp
Librado P., Rozas J. 2009. DnaSP v5: software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25: 1451–1452
Macey J. R., Ananjeva N. B., Wang Y., Papenfuss T. J. 2000. Phylogenetic relationships among Asian gekkonid lizards formerly of the genus Cyrtodactylus based on cladistic analyses of allozymic data: monophyly of Cyrtopodion and Mediodactylus. J Herpetol, 34: 258–265
Macey R., Fong J. J., Kuehl J. V., Shafei S., Ananjeva N. B., Papenfuss T. J., Boore J. L. 2005. The complete mitochondrial genome of a gecko and the phylogenetic position of the Middle Eastern Teratoscincus keyserlingii. Mol Phylogenet Evol, 36: 188–193
Moritz C., Hillis D. M. 1996. Molecular systematics: context and controversies. In: Hillis DM, Moritz C, Mable BK (eds), Molecular Systematics. Sinauer Associates, Sunderland, MA, pp 1–113
Nagy Z. T., Joger U., Guicking D., Wink M. 2002. Phylogeography of the European Whip snake Coluber (Hierophis) viridiflavus as inferred from nucleotide sequences of the mitochondrial cyt b gene and ISSR genomic fingerprinting. Biota, 3: 109–118
Nazarov R. A., Poyarkov N. A. 2013. A Taxonomic revision of the genus Tenuidactylus Szczerbak le Golubev 1984 (Reptilia: Squamata: Gekkonidae) with a description of a new species from Central Asia. Zool J, 92(11): 1312–1332 (in Russian)
Oraei H. 2009. Biosystematics and biogeography of Gekkonidae family with on Cyrtopodion genus in Iran. MSc. Thesis in Animal Biosystematics, Razi University, Kermanshah, Iran.
Posada, D. 2008. jModelTest: phylogenetic model averaging. Mol Biol Evol, 25(7): 1253–1256
Rastegar-Pouyani E., Kazemi Noureini S., Rastegar-Pouyani N., Joger U., Wink M. 2010. Molecular phylogeny and biogeography of the Eremias persica complex of the Iranian Plateau (Reptilia: Lacertidae) based on sequences of the mtDNA. Zool J Linn Soc, 158: 641–660
Rastegar-Pouyani E., Kazemi Noureini S., Rastegar-Pouyani N., Joger U., Wink M. 2012. Molecular phylogeny and intraspecific differentiation of the Eremias velox complex of the Iranian Plateau and Central Asia (Sauria, Lacertidae). J Zool Syst Evol Res, 50: 220–229
Riddly M. 2004. Evolution. 3rd Edition - Blackwell Publishing, Malden, 751 pp-
Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22: 2688–2690
Stephens M., Smith N. J., Donnelly P. 2001. A new statistical method for haplotype reconstruction from population data. Am J Hum Genetics, 68: 978–989
Swofford D. L. 2003. PAUP*. Phylogenetic analysis using parsimony (* and other methods), Version 4.0b10. Massachusetts: Sinauer Associates, Sunderland.
Szczerbak N. N., Golubev M. L. 1996. The gecko fauna of the USSR and adjacent regions [English ed., translated from the Russian by ML Golubev & SA Malinsky; AE Leviton & GR Zug, eds.]. Society for the Study of Amphibians and Reptiles, Ithaca (New York), 232 pp., 8 pls.
Szczerbak N. N. 2003. Guides to the Reptiles of the Eastern Palaearctic. Krieger Publishing Company, Malabar, FL.
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. 2011. MEGA 5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol, 28: 2731–2739
Walker D., Avise J. C. 1998. Principles of phylogeography as illustrated by freshwater and terrestrial turtles in the southeastern United States. Ann Rev Ecol Sys, 29: 23–58
Wink M., Guicking D., Fritz U. 2001. Molecular evidence for hybrid origin of Mauremys iversoni Pritchard et McCord, 1991, and Mauremys pritchardi McCord, 1997 (Reptilia: Testudines: Bataguridae). Zoologische Abhandlungen Staatliches Museum für Tierkunde Dresden, 51: 41–50

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Last Update: 2016-01-25